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Table 2 Selected genes significantly altered under high salinity growth

From: Transcriptional profiling of the model Archaeon Halobacteriumsp. NRC-1: responses to changes in salinity and temperature

Gene ID

Gene name

Former name

COG

Predicted function

Fold change values

log2(x) ratio

Standard deviation of log2(x) ratio

536

sirR

 

1321

transcription repressor

2.048

1.026

0.146

923

sfuB

 

1178

iron transporter-like protein

-1.598

-0.628

0.384

1190

sod1

 

605

superoxide dismutase

1.441

0.525

0.073

1332

sod2

 

605

superoxide dismutase

1.435

0.521

0.045

1339

lfl3

 

318

long-chain fatty-acid-CoA ligase

2.139

1.060

0.325

1814

carB

 

458

carbamoyl-phosphate synthase large subunit

2.915

1.521

0.261

1815

carA

 

505

carbamoyl-phosphate synthase small subunit

2.532

1.222

0.595

2085

phnC

 

3638

phosphonate transport ATP-binding

-1.432

-0.516

0.076

2180

hik5

vng2180

642

sensory histidine protein kinase (HisKA domain)

-1.246

-0.315

0.072

2358

appA

 

747

oligopeptide binding protein

1.525

0.579

0.290

2359

appB

 

601

oligopeptide ABC permease

1.687

0.713

0.339

2367

mdhA

 

39

L-malate dehydrogenase

1.351

0.432

0.081

2377

nosY

 

1277

nitrite/nitrate ABC transporter

1.453

0.534

0.124

2616

cxp

 

2317

carboxypeptidase

2.210

1.137

0.143

6201

hsp5

 

71

heat shock protein

-1.427

-0.510

0.093

6309

pyrB

 

540

aspartate carbamoyltransferase catalytic subunit

1.803

0.838

0.190

6311

pyrI

 

1781

aspartate carbamoyltransferase regulatory chain

1.847

0.879

0.128